Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11898-201ENSMUST00000117161 385 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm13228-201ENSMUST00000118937 634 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm15167-201ENSMUST00000121997 187 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23118-201ENSMUST00000122657 187 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm25826-201ENSMUST00000157090 137 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm22563-201ENSMUST00000157333 269 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23224-201ENSMUST00000158122 271 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm22383-201ENSMUST00000158188 327 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm15900-201ENSMUST00000161584 342 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm25314-201ENSMUST00000178810 79 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm27636-201ENSMUST00000184528 122 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm20923-201ENSMUST00000190009 319 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm38040-201ENSMUST00000193505 225 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm42522-201ENSMUST00000196071 255 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm44795-201ENSMUST00000205496 319 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm19880-201ENSMUST00000207731 318 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm33601-201ENSMUST00000210001 961 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm45742-201ENSMUST00000212400 433 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm9202-201ENSMUST00000223036 437 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Snord38a-201ENSMUST00000083746 71 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.62□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23431-201ENSMUST00000104006 107 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm24230-201ENSMUST00000104313 129 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm25563-201ENSMUST00000104603 74 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11200-201ENSMUST00000121698 448 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm25325-201ENSMUST00000122559 86 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23214-201ENSMUST00000122716 157 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm23669-201ENSMUST00000157470 128 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm21999-201ENSMUST00000165985 387 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm27976-201ENSMUST00000183635 162 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28146-201ENSMUST00000185517 701 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28574-201ENSMUST00000185757 699 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28397-201ENSMUST00000187970 699 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29366-201ENSMUST00000190481 699 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm8823-201ENSMUST00000193158 433 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Mir219c-201ENSMUST00000199860 60 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm7760-201ENSMUST00000212265 578 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm7807-201ENSMUST00000212475 578 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Gm18703-201ENSMUST00000215318 333 ntBASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sh3rf1Q69ZI1 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms