Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Six4Q61321 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Gm15120-201ENSMUST00000120602 301 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Gm11982-201ENSMUST00000121480 314 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Six4Q61321 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Six4Q61321 Gm23098-201ENSMUST00000157552 299 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Gm22519-201ENSMUST00000158270 178 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Gm4222-201ENSMUST00000165784 470 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Six4Q61321 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.89□□□□□ -1.79
Six4Q61321 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Six4Q61321 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.89□□□□□ -1.79
Six4Q61321 Gm37001-201ENSMUST00000193377 190 ntBASIC3.89□□□□□ -1.79
Six4Q61321 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Gm6240-201ENSMUST00000208014 473 ntBASIC3.89□□□□□ -1.79
Six4Q61321 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Six4Q61321 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.89□□□□□ -1.79
Six4Q61321 Gm8106-201ENSMUST00000213123 523 ntBASIC3.89□□□□□ -1.79
Six4Q61321 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.89□□□□□ -1.79
Six4Q61321 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.89□□□□□ -1.79
Six4Q61321 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.89□□□□□ -1.79
Six4Q61321 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.89□□□□□ -1.79
Six4Q61321 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.89□□□□□ -1.79
Six4Q61321 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Six4Q61321 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Six4Q61321 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Six4Q61321 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Six4Q61321 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Six4Q61321 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.89□□□□□ -1.79
Six4Q61321 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Six4Q61321 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Six4Q61321 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Six4Q61321 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Six4Q61321 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Six4Q61321 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Six4Q61321 Gm26418-201ENSMUST00000104275 137 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm15148-201ENSMUST00000117602 156 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm15021-201ENSMUST00000117832 742 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm15377-201ENSMUST00000119594 246 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.88□□□□□ -1.79
Six4Q61321 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.88□□□□□ -1.79
Six4Q61321 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Six4Q61321 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Six4Q61321 Gm22219-201ENSMUST00000157562 319 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm26001-201ENSMUST00000157989 103 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.88□□□□□ -1.79
Six4Q61321 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Six4Q61321 Gm21960-201ENSMUST00000181924 452 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Six4Q61321 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.88□□□□□ -1.79
Six4Q61321 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Six4Q61321 Gm9472-201ENSMUST00000221625 526 ntBASIC3.88□□□□□ -1.79
Six4Q61321 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Six4Q61321 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Six4Q61321 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.88□□□□□ -1.79
Six4Q61321 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Six4Q61321 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.88□□□□□ -1.79
Six4Q61321 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Six4Q61321 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Six4Q61321 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Six4Q61321 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Six4Q61321 Gm11393-201ENSMUST00000118019 288 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm12465-201ENSMUST00000118591 300 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm14103-201ENSMUST00000119075 366 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm12757-201ENSMUST00000119465 800 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
Six4Q61321 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.87□□□□□ -1.79
Six4Q61321 Gm22531-201ENSMUST00000158819 140 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm17711-201ENSMUST00000172028 237 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm37934-201ENSMUST00000192902 402 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm44403-201ENSMUST00000198554 129 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm42625-201ENSMUST00000198611 922 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.87□□□□□ -1.79
Six4Q61321 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.87□□□□□ -1.79
Six4Q61321 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.87□□□□□ -1.79
Six4Q61321 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.87□□□□□ -1.79
Six4Q61321 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.87□□□□□ -1.79
Six4Q61321 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.87□□□□□ -1.79
Six4Q61321 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.87□□□□□ -1.79
Six4Q61321 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Six4Q61321 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Six4Q61321 Gm24626-201ENSMUST00000082621 161 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Six4Q61321 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Six4Q61321 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Six4Q61321 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.87□□□□□ -1.79
Six4Q61321 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Six4Q61321 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Six4Q61321 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Six4Q61321 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms