Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox1P53783 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox1P53783 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm25096-201ENSMUST00000104043 129 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Snord66-201ENSMUST00000104051 75 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Gm14731-201ENSMUST00000119216 376 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm11862-201ENSMUST00000119678 659 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm23206-201ENSMUST00000122720 184 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm25806-201ENSMUST00000122782 122 ntBASIC5.72□□□□□ -1.49
Sox1P53783 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox1P53783 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox1P53783 Gm26153-201ENSMUST00000157433 127 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm26362-201ENSMUST00000158865 315 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm26177-201ENSMUST00000178683 107 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm27754-201ENSMUST00000183340 126 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Gm27387-201ENSMUST00000184583 116 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm2914-201ENSMUST00000186120 328 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm18802-201ENSMUST00000186270 888 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox1P53783 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm43115-201ENSMUST00000196244 160 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm42475-201ENSMUST00000201212 295 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.72□□□□□ -1.49
Sox1P53783 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox1P53783 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm23627-201ENSMUST00000082459 107 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm22502-201ENSMUST00000082488 107 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm24149-201ENSMUST00000082757 107 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox1P53783 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox1P53783 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox1P53783 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Sox1P53783 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.72□□□□□ -1.49
Sox1P53783 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox1P53783 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.71□□□□□ -1.49
Sox1P53783 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.49
Sox1P53783 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sox1P53783 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sox1P53783 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm22710-201ENSMUST00000116892 125 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm11447-201ENSMUST00000118983 858 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm16250-201ENSMUST00000148974 256 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm23538-201ENSMUST00000157535 101 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm3531-201ENSMUST00000162698 489 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Mir6401-201ENSMUST00000184499 109 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm18505-201ENSMUST00000187360 790 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm45402-201ENSMUST00000211796 223 ntBASIC5.71□□□□□ -1.5
Sox1P53783 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox1P53783 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.71□□□□□ -1.5
Sox1P53783 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.71□□□□□ -1.5
Sox1P53783 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.71□□□□□ -1.5
Sox1P53783 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm22229-201ENSMUST00000082987 108 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.71□□□□□ -1.5
Sox1P53783 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox1P53783 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Sox1P53783 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms