Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cux1P53564 Gm4987-201ENSMUST00000078326 408 ntBASIC5.59□□□□□ -1.51
Cux1P53564 Gm23297-201ENSMUST00000083184 127 ntBASIC5.59□□□□□ -1.51
Cux1P53564 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cux1P53564 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cux1P53564 Gm10811-201ENSMUST00000221985 2448 ntBASIC5.59□□□□□ -1.52
Cux1P53564 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.59□□□□□ -1.52
Cux1P53564 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cux1P53564 Gm13607-201ENSMUST00000117875 539 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm6274-201ENSMUST00000118173 797 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm24627-201ENSMUST00000122764 138 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC5.58□□□□□ -1.52
Cux1P53564 Gm22890-201ENSMUST00000158642 144 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cux1P53564 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.58□□□□□ -1.52
Cux1P53564 Gm19030-201ENSMUST00000194947 552 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.58□□□□□ -1.52
Cux1P53564 Mir28a-201ENSMUST00000083560 86 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cux1P53564 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cux1P53564 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cux1P53564 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cux1P53564 Gm24608-201ENSMUST00000104381 136 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm26145-201ENSMUST00000104476 127 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm14825-201ENSMUST00000113538 701 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cux1P53564 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cux1P53564 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC5.58□□□□□ -1.52
Cux1P53564 Gm43276-201ENSMUST00000199712 364 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.58□□□□□ -1.52
Cux1P53564 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Cux1P53564 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Cux1P53564 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cux1P53564 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cux1P53564 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.57□□□□□ -1.52
Cux1P53564 Gm15180-201ENSMUST00000117745 492 ntBASIC5.57□□□□□ -1.52
Cux1P53564 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cux1P53564 Gm16563-201ENSMUST00000162673 423 ntBASIC5.57□□□□□ -1.52
Cux1P53564 Gm6510-201ENSMUST00000195916 574 ntBASIC5.57□□□□□ -1.52
Cux1P53564 Gm44754-201ENSMUST00000208155 400 ntBASIC5.57□□□□□ -1.52
Cux1P53564 Gm9370-201ENSMUST00000222787 609 ntBASIC5.57□□□□□ -1.52
Cux1P53564 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cux1P53564 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cux1P53564 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cux1P53564 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cux1P53564 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cux1P53564 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cux1P53564 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cux1P53564 Gm42993-201ENSMUST00000196856 7325 ntBASIC5.56□□□□□ -1.52
Cux1P53564 AC159193.2-201ENSMUST00000220865 4251 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Gm13803-201ENSMUST00000117547 489 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Gm14681-201ENSMUST00000118047 411 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Gm12722-201ENSMUST00000118507 493 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cux1P53564 n-R5s45-201ENSMUST00000122592 110 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Gm26100-201ENSMUST00000157245 127 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Gm37575-201ENSMUST00000195467 309 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Gm34005-201ENSMUST00000215834 282 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Cux1P53564 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.56□□□□□ -1.52
Cux1P53564 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.56□□□□□ -1.52
Cux1P53564 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cux1P53564 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.55□□□□□ -1.52
Cux1P53564 Gm37742-201ENSMUST00000193263 3979 ntBASIC5.55□□□□□ -1.52
Cux1P53564 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Gm11708-201ENSMUST00000119530 832 ntBASIC5.55□□□□□ -1.52
Cux1P53564 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.55□□□□□ -1.52
Cux1P53564 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.55□□□□□ -1.52
Cux1P53564 Gm4725-201ENSMUST00000151048 587 ntBASIC5.55□□□□□ -1.52
Cux1P53564 Gm26045-201ENSMUST00000157862 97 ntBASIC5.55□□□□□ -1.52
Cux1P53564 Gm5058-201ENSMUST00000187331 463 ntBASIC5.55□□□□□ -1.52
Cux1P53564 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cux1P53564 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.55□□□□□ -1.52
Cux1P53564 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Cux1P53564 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cux1P53564 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cux1P53564 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cux1P53564 Gm23609-201ENSMUST00000104542 127 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cux1P53564 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Gm12149-201ENSMUST00000117511 654 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms