Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm8145-201ENSMUST00000118220 745 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm12564-201ENSMUST00000119860 321 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm12691-201ENSMUST00000120186 456 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm25179-201ENSMUST00000122632 128 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm22818-201ENSMUST00000157446 104 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm22378-201ENSMUST00000157481 111 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm22186-201ENSMUST00000157822 122 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm23046-201ENSMUST00000158369 284 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm8224-201ENSMUST00000166178 497 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm27522-201ENSMUST00000183949 230 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm29596-201ENSMUST00000185710 385 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm7299-201ENSMUST00000194441 581 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm43350-201ENSMUST00000196382 711 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Mir1892-201ENSMUST00000197752 80 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm4859-201ENSMUST00000199625 787 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm43028-201ENSMUST00000202561 481 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm44054-201ENSMUST00000203814 372 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm18268-201ENSMUST00000208445 943 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm18127-201ENSMUST00000208479 725 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 AC166902.1-201ENSMUST00000216653 517 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm8681-201ENSMUST00000219115 618 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm18026-201ENSMUST00000222789 727 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.67□□□□□ -1.82
Nkx2-1P50220 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm11898-201ENSMUST00000117161 385 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm4596-201ENSMUST00000117197 442 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm7834-201ENSMUST00000117560 437 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm15603-201ENSMUST00000119252 492 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm11262-201ENSMUST00000119326 833 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm5942-201ENSMUST00000120046 439 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm14939-201ENSMUST00000120347 680 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm15529-201ENSMUST00000121833 994 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm10059-201ENSMUST00000131139 171 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm26098-201ENSMUST00000157247 288 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm26153-201ENSMUST00000157433 127 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm20428-201ENSMUST00000174365 283 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm26828-201ENSMUST00000180640 172 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm44395-201ENSMUST00000197056 153 ntBASIC3.66□□□□□ -1.82
Nkx2-1P50220 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
Nkx2-1P50220 Gm45551-201ENSMUST00000211459 928 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms