Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm20672-201ENSMUST00000176605 261 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm37659-201ENSMUST00000194574 111 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm8274-201ENSMUST00000219820 463 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm14162-201ENSMUST00000121985 601 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm44676-201ENSMUST00000208520 3055 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm14369-201ENSMUST00000121355 285 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm6762-201ENSMUST00000121769 289 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm24443-201ENSMUST00000157242 132 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm25846-201ENSMUST00000158013 135 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm43036-201ENSMUST00000200594 373 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 AC106830.1-201ENSMUST00000228032 1003 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm25205-201ENSMUST00000082841 103 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Col6a3E9PWQ3 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm37776-201ENSMUST00000193471 2497 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm22601-201ENSMUST00000157595 250 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm28997-201ENSMUST00000188759 429 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm45070-201ENSMUST00000208100 246 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.59□□□□□ -1.83
Col6a3E9PWQ3 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm23951-201ENSMUST00000104029 132 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm24885-201ENSMUST00000158783 270 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm28900-201ENSMUST00000185232 156 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm10916-201ENSMUST00000080330 483 ntBASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Col6a3E9PWQ3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms