Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm38098-201ENSMUST00000194115 241 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm43975-201ENSMUST00000203023 481 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm44063-201ENSMUST00000203307 376 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm44523-201ENSMUST00000205616 417 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm44539-201ENSMUST00000206010 238 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm4032-201ENSMUST00000210886 487 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm22293-201ENSMUST00000083314 109 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim39Q9ESN2 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm24338-201ENSMUST00000104205 127 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm24069-201ENSMUST00000104512 127 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm12653-201ENSMUST00000117778 561 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm12871-201ENSMUST00000118758 438 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm13866-201ENSMUST00000118901 968 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm12739-201ENSMUST00000119769 382 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm15490-201ENSMUST00000119894 387 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm14049-201ENSMUST00000121009 636 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm13973-201ENSMUST00000121371 894 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm13669-201ENSMUST00000122366 457 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm23553-201ENSMUST00000157817 295 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm28717-201ENSMUST00000189950 315 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm37265-201ENSMUST00000191698 885 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm37135-201ENSMUST00000192652 534 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm4734-201ENSMUST00000200117 777 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm18482-201ENSMUST00000202405 760 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm5306-201ENSMUST00000203325 757 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm32453-201ENSMUST00000204183 456 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm17989-201ENSMUST00000211543 412 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm22300-201ENSMUST00000082661 126 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm23678-201ENSMUST00000083157 107 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm23461-201ENSMUST00000083265 107 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm25792-201ENSMUST00000083289 100 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim39Q9ESN2 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms