Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm4644-201ENSMUST00000197587 400 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm44371-201ENSMUST00000204148 467 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm26072-201ENSMUST00000083135 107 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Gm6361-201ENSMUST00000091031 435 ntBASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc3Q9D6Y1 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.84□□□□□ -1.8
Ccdc3Q9D6Y1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Ccdc3Q9D6Y1 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.84□□□□□ -1.8
Ccdc3Q9D6Y1 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.84□□□□□ -1.8
Ccdc3Q9D6Y1 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.84□□□□□ -1.8
Ccdc3Q9D6Y1 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm23133-201ENSMUST00000104255 135 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11403-201ENSMUST00000122195 369 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm25456-201ENSMUST00000157952 109 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Mir6408-201ENSMUST00000183643 91 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm28924-201ENSMUST00000190012 241 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Trbv28-201ENSMUST00000192804 264 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm36638-201ENSMUST00000193295 400 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm37239-201ENSMUST00000193510 141 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm18429-201ENSMUST00000198707 421 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm8035-201ENSMUST00000204625 687 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm45006-201ENSMUST00000206078 690 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 AC159263.3-201ENSMUST00000223434 460 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm23443-201ENSMUST00000082916 128 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Mir370-201ENSMUST00000083499 79 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc3Q9D6Y1 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm24318-201ENSMUST00000104490 131 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm28094-201ENSMUST00000185262 390 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm44845-201ENSMUST00000208773 335 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm6929-201ENSMUST00000210930 468 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm5265-201ENSMUST00000076828 342 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm25481-201ENSMUST00000083221 158 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc3Q9D6Y1 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm24982-201ENSMUST00000104456 132 ntBASIC3.81□□□□□ -1.8
Ccdc3Q9D6Y1 Gm13664-201ENSMUST00000117304 345 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms