Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm11321-201ENSMUST00000121257 902 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm25389-201ENSMUST00000157340 286 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm16125-201ENSMUST00000159003 339 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm18953-201ENSMUST00000175694 300 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm43494-201ENSMUST00000197672 388 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm45312-201ENSMUST00000210566 311 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm8672-201ENSMUST00000221200 332 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm25512-201ENSMUST00000083863 107 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm23274-201ENSMUST00000104056 130 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm11322-201ENSMUST00000118095 435 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm14933-201ENSMUST00000118840 481 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm13627-201ENSMUST00000119700 706 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm15014-201ENSMUST00000120742 258 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm13009-201ENSMUST00000121307 267 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm15899-201ENSMUST00000128586 238 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm25861-201ENSMUST00000158251 109 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm25048-201ENSMUST00000158598 91 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm9071-201ENSMUST00000165915 474 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm37111-201ENSMUST00000193250 634 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm9227-201ENSMUST00000194733 566 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm37418-201ENSMUST00000195031 274 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm18036-201ENSMUST00000195256 272 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 BX530055.1-201ENSMUST00000197285 122 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm43712-201ENSMUST00000198020 291 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm7721-201ENSMUST00000200446 546 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm43418-201ENSMUST00000201334 428 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm8719-201ENSMUST00000203602 534 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 AC134468.2-201ENSMUST00000222549 672 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 AC239878.2-201ENSMUST00000224048 464 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 AC161758.1-201ENSMUST00000226123 310 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Olfr1193-201ENSMUST00000081697 957 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC6.11□□□□□ -1.43
Trim56Q80VI1 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim56Q80VI1 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm24789-201ENSMUST00000104282 131 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Mir208b-201ENSMUST00000104735 77 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm14086-201ENSMUST00000117152 173 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm14670-201ENSMUST00000117327 337 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms