Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm15400-201ENSMUST00000118944 601 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm13503-201ENSMUST00000119017 446 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm5405-201ENSMUST00000120478 609 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm22236-201ENSMUST00000157093 106 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm27875-201ENSMUST00000184425 123 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Mir6899-201ENSMUST00000184798 64 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm17929-201ENSMUST00000186851 627 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm42643-201ENSMUST00000200504 279 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm45063-201ENSMUST00000203726 472 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm43919-201ENSMUST00000204303 364 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.97□□□□□ -1.45
Col6a1Q04857 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm6104-201ENSMUST00000078030 603 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm8724-201ENSMUST00000081668 483 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a1Q04857 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Col6a1Q04857 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.97□□□□□ -1.45
Col6a1Q04857 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a1Q04857 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a1Q04857 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a1Q04857 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col6a1Q04857 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Col6a1Q04857 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm14897-201ENSMUST00000118213 207 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm16254-201ENSMUST00000131528 730 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.96□□□□□ -1.46
Col6a1Q04857 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a1Q04857 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm9687-201ENSMUST00000189312 602 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm43408-201ENSMUST00000198263 440 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Gm19140-201ENSMUST00000209790 421 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.96□□□□□ -1.46
Col6a1Q04857 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms