Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm15994-201ENSMUST00000118029 402 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm14649-201ENSMUST00000121814 324 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm22514-201ENSMUST00000122547 308 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.19□□□□□ -1.9
Col8a2P25318 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm23179-201ENSMUST00000158693 304 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm28010-201ENSMUST00000179485 126 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col8a2P25318 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm27760-201ENSMUST00000185048 114 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm18747-201ENSMUST00000198129 648 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm43892-201ENSMUST00000204373 265 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.19□□□□□ -1.9
Col8a2P25318 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Col8a2P25318 Gm8106-201ENSMUST00000213123 523 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Gm18507-201ENSMUST00000218855 525 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col8a2P25318 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col8a2P25318 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col8a2P25318 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col8a2P25318 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Col8a2P25318 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col8a2P25318 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Col8a2P25318 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.19□□□□□ -1.9
Col8a2P25318 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col8a2P25318 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a2P25318 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a2P25318 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col8a2P25318 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a2P25318 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a2P25318 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a2P25318 Gm15018-201ENSMUST00000117090 633 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm14621-201ENSMUST00000117709 689 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm14586-201ENSMUST00000119571 408 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm15263-201ENSMUST00000121556 642 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm11965-201ENSMUST00000122017 277 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm3160-201ENSMUST00000128343 607 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.18□□□□□ -1.9
Col8a2P25318 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col8a2P25318 Gm28847-201ENSMUST00000186778 700 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm29552-201ENSMUST00000190548 660 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm37164-201ENSMUST00000192809 637 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm37300-201ENSMUST00000193327 280 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm37239-201ENSMUST00000193510 141 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Mir142-201ENSMUST00000198092 64 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm44371-201ENSMUST00000204148 467 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm18944-201ENSMUST00000207672 643 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm6240-201ENSMUST00000208014 473 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm45162-201ENSMUST00000209013 618 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm45689-201ENSMUST00000210522 133 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm19885-201ENSMUST00000212853 343 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.18□□□□□ -1.9
Col8a2P25318 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.18□□□□□ -1.9
Col8a2P25318 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm46996-201ENSMUST00000220924 408 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.18□□□□□ -1.9
Col8a2P25318 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Col8a2P25318 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a2P25318 Mir28a-201ENSMUST00000083560 86 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Gm24917-201ENSMUST00000083935 104 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col8a2P25318 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.18□□□□□ -1.9
Col8a2P25318 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col8a2P25318 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Col8a2P25318 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col8a2P25318 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a2P25318 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a2P25318 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col8a2P25318 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col8a2P25318 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a2P25318 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.17□□□□□ -1.9
Col8a2P25318 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a2P25318 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a2P25318 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms