Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lire1P11260 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Lire1P11260 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lire1P11260 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm14067-201ENSMUST00000119340 314 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm14586-201ENSMUST00000119571 408 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm12739-201ENSMUST00000119769 382 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm22478-201ENSMUST00000122570 154 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Lire1P11260 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Lire1P11260 Gm23906-201ENSMUST00000157573 128 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm24217-201ENSMUST00000158260 133 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm24875-201ENSMUST00000158888 104 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm17204-201ENSMUST00000167936 478 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lire1P11260 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Lire1P11260 Mir6410-201ENSMUST00000184204 104 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm27477-201ENSMUST00000184649 143 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Mir6975-201ENSMUST00000184879 61 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm27286-201ENSMUST00000184934 179 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lire1P11260 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Lire1P11260 Gm4412-201ENSMUST00000186660 433 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.42□□□□□ -1.7
Lire1P11260 Gm29036-201ENSMUST00000189967 877 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm38046-201ENSMUST00000192733 550 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lire1P11260 Gm9442-201ENSMUST00000194242 319 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm43491-201ENSMUST00000197133 784 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm6719-201ENSMUST00000202067 335 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm44757-201ENSMUST00000206373 157 ntBASIC4.42□□□□□ -1.7
Lire1P11260 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lire1P11260 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Lire1P11260 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lire1P11260 Gm25800-201ENSMUST00000082636 134 ntBASIC4.42□□□□□ -1.7
Lire1P11260 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Gm8074-201ENSMUST00000095071 252 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lire1P11260 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.42□□□□□ -1.7
Lire1P11260 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.41□□□□□ -1.7
Lire1P11260 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm12112-201ENSMUST00000117772 231 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm14933-201ENSMUST00000118840 481 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm15357-201ENSMUST00000119160 285 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm11822-201ENSMUST00000119177 415 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm11746-201ENSMUST00000119843 821 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm12237-201ENSMUST00000120158 470 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm15390-201ENSMUST00000120323 738 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm22601-201ENSMUST00000157595 250 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm26404-201ENSMUST00000158498 109 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm20657-201ENSMUST00000177079 515 ntBASIC4.41□□□□□ -1.7
Lire1P11260 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm8599-201ENSMUST00000193033 457 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm20056-201ENSMUST00000194813 519 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.41□□□□□ -1.7
Lire1P11260 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm44681-201ENSMUST00000208447 842 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.41□□□□□ -1.7
Lire1P11260 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Lire1P11260 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Gm7040-201ENSMUST00000223271 443 ntBASIC4.41□□□□□ -1.7
Lire1P11260 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lire1P11260 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.41□□□□□ -1.7
Lire1P11260 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lire1P11260 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lire1P11260 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Lire1P11260 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.4□□□□□ -1.7
Lire1P11260 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Lire1P11260 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Lire1P11260 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.4□□□□□ -1.7
Lire1P11260 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms