Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm24898-201ENSMUST00000158133 106 ntBASIC4.34□□□□□ -1.71
Col1a1P11087 Gm24976-201ENSMUST00000158972 135 ntBASIC4.34□□□□□ -1.71
Col1a1P11087 Gm16566-201ENSMUST00000160387 910 ntBASIC4.34□□□□□ -1.71
Col1a1P11087 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm44773-201ENSMUST00000207374 557 ntBASIC4.34□□□□□ -1.71
Col1a1P11087 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Col1a1P11087 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.34□□□□□ -1.72
Col1a1P11087 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Col1a1P11087 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col1a1P11087 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.34□□□□□ -1.72
Col1a1P11087 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm24118-201ENSMUST00000103972 126 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm22311-201ENSMUST00000158006 110 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gm23773-201ENSMUST00000158985 296 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm24369-201ENSMUST00000175387 96 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm29104-201ENSMUST00000186304 222 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gm37698-201ENSMUST00000192605 463 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gm7142-201ENSMUST00000194232 586 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.33□□□□□ -1.72
Col1a1P11087 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col1a1P11087 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col1a1P11087 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col1a1P11087 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col1a1P11087 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.33□□□□□ -1.72
Col1a1P11087 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col1a1P11087 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col1a1P11087 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col1a1P11087 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col1a1P11087 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col1a1P11087 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col1a1P11087 Gm26045-201ENSMUST00000157862 97 ntBASIC4.32□□□□□ -1.72
Col1a1P11087 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.32□□□□□ -1.72
Col1a1P11087 Gm28660-201ENSMUST00000186496 253 ntBASIC4.32□□□□□ -1.72
Col1a1P11087 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col1a1P11087 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col1a1P11087 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col1a1P11087 Gm10145-201ENSMUST00000077776 462 ntBASIC4.32□□□□□ -1.72
Col1a1P11087 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Col1a1P11087 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Col1a1P11087 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Col1a1P11087 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col1a1P11087 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Col1a1P11087 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col1a1P11087 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col1a1P11087 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col1a1P11087 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.31□□□□□ -1.72
Col1a1P11087 Gm20177-201ENSMUST00000203705 334 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.31□□□□□ -1.72
Col1a1P11087 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col1a1P11087 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col1a1P11087 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.31□□□□□ -1.72
Col1a1P11087 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col1a1P11087 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col1a1P11087 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col1a1P11087 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm25407-201ENSMUST00000104102 134 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm23747-201ENSMUST00000104228 131 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm15212-201ENSMUST00000122403 466 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm16303-201ENSMUST00000161498 390 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm44927-201ENSMUST00000207573 716 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm18194-201ENSMUST00000210455 481 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Gm8785-201ENSMUST00000220259 487 ntBASIC4.3□□□□□ -1.72
Col1a1P11087 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col1a1P11087 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Col1a1P11087 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms