Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Gm23104-201ENSMUST00000083722 104 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Vps28Q9D1C8 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.6□□□□□ -1.67
Vps28Q9D1C8 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm14931-201ENSMUST00000111079 253 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm6429-201ENSMUST00000117144 475 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm14304-201ENSMUST00000117272 446 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm8051-201ENSMUST00000120464 466 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm11404-201ENSMUST00000120872 494 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm22514-201ENSMUST00000122547 308 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm6969-201ENSMUST00000140065 342 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Mir5106-201ENSMUST00000174936 73 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm6214-201ENSMUST00000178845 541 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm27033-201ENSMUST00000183226 544 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm27805-201ENSMUST00000184513 79 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm37836-201ENSMUST00000195875 175 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm43897-201ENSMUST00000204019 309 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm45081-201ENSMUST00000206281 572 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm7034-201ENSMUST00000218638 645 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm17872-201ENSMUST00000222550 532 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Gm25147-201ENSMUST00000083030 105 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Mir215-201ENSMUST00000083628 112 ntBASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vps28Q9D1C8 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Vps28Q9D1C8 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm22657-201ENSMUST00000104197 132 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm10552-201ENSMUST00000113396 372 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm14388-201ENSMUST00000118119 477 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm12788-201ENSMUST00000119090 308 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm14926-201ENSMUST00000120650 508 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm13092-201ENSMUST00000136346 260 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm23465-201ENSMUST00000157134 262 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm22536-201ENSMUST00000158171 134 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm16147-201ENSMUST00000162143 373 ntBASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vps28Q9D1C8 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms