Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm43924-201ENSMUST00000204851 1736 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm22101-201ENSMUST00000157928 103 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm24192-201ENSMUST00000157978 145 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm24735-201ENSMUST00000158859 118 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm26556-201ENSMUST00000180645 320 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm21070-201ENSMUST00000182425 985 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm28579-201ENSMUST00000186143 369 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm29332-201ENSMUST00000190829 227 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Ighv1-6-201ENSMUST00000193849 293 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm43779-201ENSMUST00000196691 829 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm44984-201ENSMUST00000207802 394 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC090496.1-201ENSMUST00000226020 260 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC154640.2-201ENSMUST00000226324 472 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC120553.1-201ENSMUST00000227313 260 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 CT573086.3-201ENSMUST00000228762 594 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm26128-201ENSMUST00000083170 110 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Mir31-201ENSMUST00000083474 106 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Olfr203-201ENSMUST00000089305 924 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm38212-201ENSMUST00000194081 2756 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.03□□□□□ -1.44
Clp1Q99LI9 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
Clp1Q99LI9 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm24120-201ENSMUST00000103978 129 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm11372-201ENSMUST00000117348 570 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm24419-201ENSMUST00000157875 332 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm23855-201ENSMUST00000158377 135 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm7609-204ENSMUST00000161424 461 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm18828-202ENSMUST00000181035 310 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm27028-201ENSMUST00000182303 399 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Mir7056-201ENSMUST00000183776 59 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm18427-201ENSMUST00000195422 515 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm18791-201ENSMUST00000204611 726 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm45367-201ENSMUST00000210171 347 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm18120-201ENSMUST00000220079 511 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm18116-201ENSMUST00000220920 537 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm10038-201ENSMUST00000077233 441 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm24460-201ENSMUST00000082731 106 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm37639-201ENSMUST00000191623 2785 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Clp1Q99LI9 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.02□□□□□ -1.45
Clp1Q99LI9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Clp1Q99LI9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms