Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm14082-201ENSMUST00000118582 801 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm12448-201ENSMUST00000118852 655 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm4234-201ENSMUST00000119747 714 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm14563-201ENSMUST00000120571 354 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm15267-201ENSMUST00000120888 464 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm27985-201ENSMUST00000185112 378 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm37235-201ENSMUST00000195171 59 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm43779-201ENSMUST00000196691 829 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm7042-201ENSMUST00000223027 384 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm23733-201ENSMUST00000083750 106 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm16261-201ENSMUST00000096813 205 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm11268-201ENSMUST00000118347 267 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm6584-201ENSMUST00000119671 447 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm14175-201ENSMUST00000119835 241 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm16100-201ENSMUST00000120489 231 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm24836-201ENSMUST00000122609 108 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm26101-201ENSMUST00000157246 105 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm24750-201ENSMUST00000157843 104 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm20549-201ENSMUST00000174804 429 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm18117-201ENSMUST00000187720 742 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm28744-201ENSMUST00000189939 340 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm38131-201ENSMUST00000192449 430 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm20770-201ENSMUST00000193474 694 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm17988-201ENSMUST00000208796 535 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm8158-201ENSMUST00000219220 465 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm8249-201ENSMUST00000219225 465 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm8112-201ENSMUST00000219637 465 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm6056-201ENSMUST00000221253 488 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm9269-201ENSMUST00000221661 578 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 CT025536.1-201ENSMUST00000226744 844 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm43065-201ENSMUST00000198971 2092 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim47Q8C0E3 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim47Q8C0E3 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms