Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm14050-201ENSMUST00000117052 346 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm13087-201ENSMUST00000118298 256 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm13339-201ENSMUST00000120651 510 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm26271-201ENSMUST00000158349 104 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm3111-201ENSMUST00000167426 490 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm25944-201ENSMUST00000178758 94 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm27317-201ENSMUST00000183533 95 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm18448-201ENSMUST00000186286 599 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm2314-201ENSMUST00000200391 586 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm3148-201ENSMUST00000203594 612 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm2011-203ENSMUST00000203750 435 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm40692-201ENSMUST00000220411 491 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm22155-201ENSMUST00000083836 162 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.91□□□□□ -1.62
Sp140Q6NSQ5 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Sp140Q6NSQ5 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm14385-201ENSMUST00000116315 876 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm13451-201ENSMUST00000117649 592 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm13491-201ENSMUST00000118267 235 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm11943-201ENSMUST00000119473 327 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm25290-201ENSMUST00000122796 144 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm24690-201ENSMUST00000157759 97 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm16588-201ENSMUST00000162889 355 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm5929-201ENSMUST00000166883 487 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm17081-201ENSMUST00000167363 478 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm18396-201ENSMUST00000177095 361 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm18185-201ENSMUST00000186725 667 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm6137-201ENSMUST00000187552 578 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm42643-201ENSMUST00000200504 279 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm44254-201ENSMUST00000204184 322 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm18597-201ENSMUST00000209519 694 ntBASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.9□□□□□ -1.63
Sp140Q6NSQ5 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms