Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm12110-201ENSMUST00000121601 579 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm22204-201ENSMUST00000122654 327 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm15501-202ENSMUST00000140687 625 ntBASIC5.76□□□□□ -1.49
Sox1P53783 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.76□□□□□ -1.49
Sox1P53783 Gm25827-201ENSMUST00000157089 107 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm6486-201ENSMUST00000166202 434 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm8214-201ENSMUST00000172123 351 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm14596-201ENSMUST00000180268 537 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm14595-201ENSMUST00000180335 537 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm26866-201ENSMUST00000180414 802 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm26988-201ENSMUST00000183296 945 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm23925-202ENSMUST00000188429 132 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm37882-201ENSMUST00000195254 196 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm6051-201ENSMUST00000201529 352 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm18924-201ENSMUST00000211929 316 ntBASIC5.76□□□□□ -1.49
Sox1P53783 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.76□□□□□ -1.49
Sox1P53783 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm5215-201ENSMUST00000054380 405 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Sox1P53783 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Sox1P53783 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox1P53783 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Gm13475-201ENSMUST00000119290 234 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm15177-201ENSMUST00000120491 577 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm15075-201ENSMUST00000122187 477 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm24419-201ENSMUST00000157875 332 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm25048-201ENSMUST00000158598 91 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm7094-201ENSMUST00000178379 366 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Gm28390-201ENSMUST00000185212 700 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm37743-201ENSMUST00000194645 376 ntBASIC5.75□□□□□ -1.49
Sox1P53783 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm43408-201ENSMUST00000198263 440 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm17951-201ENSMUST00000198536 496 ntBASIC5.75□□□□□ -1.49
Sox1P53783 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm43825-201ENSMUST00000199650 734 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm44108-201ENSMUST00000203525 422 ntBASIC5.75□□□□□ -1.49
Sox1P53783 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Gm44580-201ENSMUST00000206333 877 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm19880-201ENSMUST00000207731 318 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm44852-201ENSMUST00000207950 369 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.75□□□□□ -1.49
Sox1P53783 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm18120-201ENSMUST00000220079 511 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.75□□□□□ -1.49
Sox1P53783 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.75□□□□□ -1.49
Sox1P53783 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Gm23096-201ENSMUST00000083447 107 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Gm16261-201ENSMUST00000096813 205 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox1P53783 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sox1P53783 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.75□□□□□ -1.49
Sox1P53783 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox1P53783 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.74□□□□□ -1.49
Sox1P53783 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox1P53783 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms