Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.21□□□□□ -1.58
Shmt1P50431 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm5045-201ENSMUST00000027054 810 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.21□□□□□ -1.58
Shmt1P50431 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Shmt1P50431 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Shmt1P50431 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Shmt1P50431 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.21□□□□□ -1.58
Shmt1P50431 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm25876-201ENSMUST00000104329 119 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm23792-201ENSMUST00000122557 93 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm16274-201ENSMUST00000139251 592 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm16259-201ENSMUST00000145241 553 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm25185-201ENSMUST00000157754 96 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm17155-201ENSMUST00000165969 473 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm37828-201ENSMUST00000192496 432 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm18900-201ENSMUST00000193218 584 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.2□□□□□ -1.58
Shmt1P50431 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm44254-201ENSMUST00000204184 322 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm45192-201ENSMUST00000206749 283 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm44910-201ENSMUST00000208451 396 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Shmt1P50431 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm23927-201ENSMUST00000082466 215 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Gm24207-201ENSMUST00000082781 108 ntBASIC5.2□□□□□ -1.58
Shmt1P50431 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Shmt1P50431 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Shmt1P50431 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Shmt1P50431 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Shmt1P50431 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Shmt1P50431 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Shmt1P50431 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Shmt1P50431 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Shmt1P50431 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Shmt1P50431 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Shmt1P50431 Gm22195-201ENSMUST00000116861 108 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm22676-201ENSMUST00000116972 129 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm11488-201ENSMUST00000117277 863 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm15312-201ENSMUST00000118827 271 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm11719-201ENSMUST00000119399 351 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm11512-201ENSMUST00000119669 663 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm13865-201ENSMUST00000120957 865 ntBASIC5.19□□□□□ -1.58
Shmt1P50431 Gm15309-201ENSMUST00000121644 240 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms