Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC162908.1-201ENSMUST00000219164 4563 ntBASIC3.85□□□□□ -1.79
HttP42859 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HttP42859 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HttP42859 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HttP42859 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.84□□□□□ -1.79
HttP42859 Gm13329-201ENSMUST00000117063 265 ntBASIC3.84□□□□□ -1.79
HttP42859 Gm13831-201ENSMUST00000118764 302 ntBASIC3.84□□□□□ -1.79
HttP42859 Gm44526-201ENSMUST00000204664 121 ntBASIC3.84□□□□□ -1.79
HttP42859 Gm45070-201ENSMUST00000208100 246 ntBASIC3.84□□□□□ -1.79
HttP42859 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC3.84□□□□□ -1.79
HttP42859 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HttP42859 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC3.84□□□□□ -1.79
HttP42859 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC3.84□□□□□ -1.79
HttP42859 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HttP42859 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HttP42859 Gm24358-201ENSMUST00000158424 288 ntBASIC3.84□□□□□ -1.79
HttP42859 Gm4222-201ENSMUST00000165784 470 ntBASIC3.84□□□□□ -1.79
HttP42859 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.84□□□□□ -1.79
HttP42859 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HttP42859 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
HttP42859 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
HttP42859 Gm37611-201ENSMUST00000195250 2028 ntBASIC3.84□□□□□ -1.8
HttP42859 Gm12001-201ENSMUST00000121727 913 ntBASIC3.84□□□□□ -1.8
HttP42859 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HttP42859 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.84□□□□□ -1.8
HttP42859 Gm26129-201ENSMUST00000082719 107 ntBASIC3.84□□□□□ -1.8
HttP42859 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HttP42859 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.83□□□□□ -1.8
HttP42859 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
HttP42859 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HttP42859 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HttP42859 Gm24441-201ENSMUST00000157235 281 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm25373-201ENSMUST00000158156 115 ntBASIC3.83□□□□□ -1.8
HttP42859 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 Gm44972-201ENSMUST00000206419 406 ntBASIC3.83□□□□□ -1.8
HttP42859 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HttP42859 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.83□□□□□ -1.8
HttP42859 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.83□□□□□ -1.8
HttP42859 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.83□□□□□ -1.8
HttP42859 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
HttP42859 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HttP42859 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HttP42859 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HttP42859 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HttP42859 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm14212-201ENSMUST00000122023 826 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm22099-201ENSMUST00000157925 123 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm24734-201ENSMUST00000158860 262 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.83□□□□□ -1.8
HttP42859 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm29105-201ENSMUST00000187256 450 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm24350-202ENSMUST00000198309 132 ntBASIC3.83□□□□□ -1.8
HttP42859 Gm44964-201ENSMUST00000207011 273 ntBASIC3.83□□□□□ -1.8
HttP42859 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HttP42859 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
HttP42859 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HttP42859 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC3.82□□□□□ -1.8
HttP42859 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.82□□□□□ -1.8
HttP42859 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HttP42859 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.82□□□□□ -1.8
HttP42859 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.82□□□□□ -1.8
HttP42859 Gm26215-201ENSMUST00000158584 139 ntBASIC3.82□□□□□ -1.8
HttP42859 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.82□□□□□ -1.8
HttP42859 Gm25707-201ENSMUST00000175120 96 ntBASIC3.82□□□□□ -1.8
HttP42859 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.82□□□□□ -1.8
HttP42859 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.82□□□□□ -1.8
HttP42859 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.82□□□□□ -1.8
HttP42859 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HttP42859 Gm23377-201ENSMUST00000082943 126 ntBASIC3.82□□□□□ -1.8
HttP42859 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
HttP42859 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HttP42859 Gm12617-201ENSMUST00000121268 381 ntBASIC3.82□□□□□ -1.8
HttP42859 Gm16218-201ENSMUST00000155424 388 ntBASIC3.82□□□□□ -1.8
HttP42859 Gm28186-201ENSMUST00000187447 679 ntBASIC3.82□□□□□ -1.8
HttP42859 Gm37490-201ENSMUST00000195566 724 ntBASIC3.82□□□□□ -1.8
HttP42859 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HttP42859 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.82□□□□□ -1.8
HttP42859 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HttP42859 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.82□□□□□ -1.8
HttP42859 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HttP42859 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HttP42859 Gm5762-201ENSMUST00000119204 258 ntBASIC3.81□□□□□ -1.8
HttP42859 Gm24691-201ENSMUST00000157762 140 ntBASIC3.81□□□□□ -1.8
HttP42859 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.81□□□□□ -1.8
HttP42859 Gm7870-201ENSMUST00000184467 616 ntBASIC3.81□□□□□ -1.8
HttP42859 Gm32175-201ENSMUST00000193641 346 ntBASIC3.81□□□□□ -1.8
HttP42859 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.81□□□□□ -1.8
HttP42859 Gm42520-201ENSMUST00000199642 1502 ntBASIC3.81□□□□□ -1.8
HttP42859 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
HttP42859 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HttP42859 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HttP42859 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HttP42859 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.81□□□□□ -1.8
HttP42859 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms