Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 Gm4410-201ENSMUST00000199349 686 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 Gm7751-201ENSMUST00000212868 709 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Gm4036-201ENSMUST00000220842 626 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col18a1P39061 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Gm23846-201ENSMUST00000083835 107 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col18a1P39061 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col18a1P39061 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Col18a1P39061 Gm11876-201ENSMUST00000120002 269 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm9003-201ENSMUST00000121810 482 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm23379-201ENSMUST00000180026 107 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm28614-201ENSMUST00000186483 458 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm28267-201ENSMUST00000191093 265 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm32536-201ENSMUST00000205209 445 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 AC158982.2-201ENSMUST00000226283 184 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col18a1P39061 n-R5s196-201ENSMUST00000083136 117 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm25582-201ENSMUST00000083412 110 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col18a1P39061 AC137842.3-201ENSMUST00000228855 2397 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 AC154511.1-201ENSMUST00000222578 1587 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col18a1P39061 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col18a1P39061 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col18a1P39061 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col18a1P39061 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col18a1P39061 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col18a1P39061 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col18a1P39061 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm4910-201ENSMUST00000119605 366 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Mir5106-201ENSMUST00000174936 73 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm28997-201ENSMUST00000188759 429 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm37098-201ENSMUST00000192290 244 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm38360-201ENSMUST00000195130 454 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm44927-201ENSMUST00000207573 716 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 AC124399.1-201ENSMUST00000218334 590 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col18a1P39061 Gm25578-201ENSMUST00000083406 104 ntBASIC6.18□□□□□ -1.42
Col18a1P39061 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Col18a1P39061 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col18a1P39061 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col18a1P39061 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Col18a1P39061 AC126673.1-201ENSMUST00000223208 3856 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm14282-201ENSMUST00000119484 240 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm8757-201ENSMUST00000119660 372 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm11512-201ENSMUST00000119669 663 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm22755-201ENSMUST00000157143 100 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm23034-201ENSMUST00000158001 147 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm22120-201ENSMUST00000175590 70 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm22111-201ENSMUST00000178010 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm21737-201ENSMUST00000178112 664 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm23687-201ENSMUST00000178664 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm24566-201ENSMUST00000179286 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm23305-201ENSMUST00000179342 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm26389-201ENSMUST00000179819 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm22130-201ENSMUST00000179979 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm22393-201ENSMUST00000180153 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm20901-201ENSMUST00000180177 664 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm25085-201ENSMUST00000180298 79 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm5974-201ENSMUST00000181607 986 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm28843-201ENSMUST00000189198 678 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm28090-201ENSMUST00000189458 664 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm21647-201ENSMUST00000189755 664 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm29546-201ENSMUST00000191171 678 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm44054-201ENSMUST00000203814 372 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm44088-201ENSMUST00000204595 237 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm18774-201ENSMUST00000218269 601 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC6.17□□□□□ -1.42
Col18a1P39061 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.17□□□□□ -1.42
Col18a1P39061 AC129202.3-201ENSMUST00000224413 733 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm45211-201ENSMUST00000206208 2650 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col18a1P39061 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col18a1P39061 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.17□□□□□ -1.42
Col18a1P39061 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms