Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm36954-201ENSMUST00000195362 363 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm8035-201ENSMUST00000204625 687 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm45574-201ENSMUST00000210921 331 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm23273-201ENSMUST00000104058 135 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm15151-201ENSMUST00000117106 177 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm14753-201ENSMUST00000118503 246 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm13677-201ENSMUST00000120739 595 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm14977-201ENSMUST00000121626 812 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Snora81-201ENSMUST00000157310 178 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm25427-201ENSMUST00000157605 103 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm6650-201ENSMUST00000166710 614 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm38061-201ENSMUST00000192490 365 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm43424-201ENSMUST00000200484 253 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm29815-201ENSMUST00000202418 178 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm24319-201ENSMUST00000083389 107 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.3□□□□□ -1.72
Chmp6P0C0A3 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm8757-201ENSMUST00000119660 372 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm11483-201ENSMUST00000119839 247 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm14991-201ENSMUST00000119913 598 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm26320-201ENSMUST00000157742 306 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm26219-201ENSMUST00000175216 71 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm28920-201ENSMUST00000189957 699 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm28500-201ENSMUST00000190286 151 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm37293-201ENSMUST00000191658 295 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm18016-201ENSMUST00000216119 801 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm18871-201ENSMUST00000218655 745 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Chmp6P0C0A3 Gm26072-201ENSMUST00000083135 107 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms