Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm44433-201ENSMUST00000203540 4832 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm7071-201ENSMUST00000120458 462 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm44609-201ENSMUST00000207157 460 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm42905-201ENSMUST00000196237 1611 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm20667-201ENSMUST00000175674 1930 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm42478-201ENSMUST00000199252 1467 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 AC115910.1-201ENSMUST00000221188 4275 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm11869-201ENSMUST00000118701 329 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm15034-201ENSMUST00000120043 349 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm23123-201ENSMUST00000157648 144 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm43390-201ENSMUST00000196614 421 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Mir879-201ENSMUST00000104703 76 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm37533-201ENSMUST00000193848 545 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 AC154335.1-201ENSMUST00000224744 395 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm25636-201ENSMUST00000082666 133 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.66□□□□□ -1.82
Col6a3E9PWQ3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Gm42611-201ENSMUST00000199446 3407 ntBASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Gm14389-201ENSMUST00000140453 241 ntBASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Gm4761-201ENSMUST00000178086 582 ntBASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC3.65□□□□□ -1.82
Col6a3E9PWQ3 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm11566-201ENSMUST00000118550 203 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm24958-201ENSMUST00000158009 97 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm20177-201ENSMUST00000203705 334 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm18255-201ENSMUST00000211316 765 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm22970-201ENSMUST00000083304 186 ntBASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col6a3E9PWQ3 Gm12543-201ENSMUST00000120410 543 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms