Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm15533-202ENSMUST00000206216 3262 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Cald1-202ENSMUST00000079391 4127 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Mylk3-201ENSMUST00000034133 3696 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 AC122850.1-201ENSMUST00000220380 5690 ntBASIC1.15□□□□□ -2.22
Gm4559A4IF42 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Gm37530-201ENSMUST00000191759 4932 ntBASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Tll2-202ENSMUST00000169941 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Gm42972-201ENSMUST00000196937 5617 ntBASIC1.15□□□□□ -2.22
Gm4559A4IF42 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Gm43970-201ENSMUST00000204346 3605 ntBASIC1.15□□□□□ -2.22
Gm4559A4IF42 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 AC164883.2-201ENSMUST00000227931 3815 ntBASIC1.15□□□□□ -2.22
Gm4559A4IF42 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Oprl1-202ENSMUST00000108763 2971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Nr1h3-201ENSMUST00000002177 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Hp1bp3-214ENSMUST00000165861 3361 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Gm4559A4IF42 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Taf12-201ENSMUST00000030731 3787 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Gm4559A4IF42 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms