Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm6990-201ENSMUST00000086830 348 ntBASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Gm6043-201ENSMUST00000099961 492 ntBASIC5.6□□□□□ -1.51
Trim39Q9ESN2 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim39Q9ESN2 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim39Q9ESN2 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim39Q9ESN2 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm13193-201ENSMUST00000117275 225 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm13064-201ENSMUST00000119125 557 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm6744-201ENSMUST00000119303 543 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm5384-201ENSMUST00000120313 463 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm13214-201ENSMUST00000122137 408 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm17148-201ENSMUST00000164702 249 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm28781-201ENSMUST00000185760 696 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm29307-201ENSMUST00000187367 696 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm19641-201ENSMUST00000188432 417 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm29339-201ENSMUST00000189613 696 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm29407-201ENSMUST00000191468 696 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm44319-201ENSMUST00000196974 93 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm43561-201ENSMUST00000199866 448 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm45508-201ENSMUST00000209298 299 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm18620-201ENSMUST00000222295 324 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm24032-201ENSMUST00000083932 159 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.59□□□□□ -1.51
Trim39Q9ESN2 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.59□□□□□ -1.52
Trim39Q9ESN2 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim39Q9ESN2 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm11271-201ENSMUST00000116054 440 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm23988-201ENSMUST00000117034 122 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm8501-201ENSMUST00000117684 432 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm5073-201ENSMUST00000118222 820 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm11936-201ENSMUST00000118323 160 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm15765-201ENSMUST00000118407 910 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm14018-201ENSMUST00000119042 455 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm14647-201ENSMUST00000119392 680 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm12693-201ENSMUST00000121965 483 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm12929-201ENSMUST00000122406 370 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Mir1960-201ENSMUST00000157488 78 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm23499-201ENSMUST00000157736 268 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm27803-201ENSMUST00000183763 119 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm9775-201ENSMUST00000189402 331 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm5886-202ENSMUST00000203957 522 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm18791-201ENSMUST00000204611 726 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm19900-201ENSMUST00000207285 576 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim39Q9ESN2 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.58□□□□□ -1.52
Trim39Q9ESN2 Gm5955-201ENSMUST00000222712 219 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms