Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm36943-201ENSMUST00000194422 282 ntBASIC5.2□□□□□ -1.58
Cpsf1Q9EPU4 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC5.2□□□□□ -1.58
Cpsf1Q9EPU4 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.2□□□□□ -1.58
Cpsf1Q9EPU4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.2□□□□□ -1.58
Cpsf1Q9EPU4 AC153948.1-201ENSMUST00000219080 3838 ntBASIC5.2□□□□□ -1.58
Cpsf1Q9EPU4 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cpsf1Q9EPU4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm8244-201ENSMUST00000121254 264 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm14649-201ENSMUST00000121814 324 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm22840-201ENSMUST00000158444 136 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm25977-201ENSMUST00000158697 85 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm29148-201ENSMUST00000188140 336 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.19□□□□□ -1.58
Cpsf1Q9EPU4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm25860-201ENSMUST00000158252 126 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm27903-201ENSMUST00000175482 126 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Mir7682-201ENSMUST00000198467 58 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm19196-201ENSMUST00000209258 357 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 AC107864.1-201ENSMUST00000217937 496 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm25205-201ENSMUST00000082841 103 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm45884-201ENSMUST00000209540 3416 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.18□□□□□ -1.58
Cpsf1Q9EPU4 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm14687-201ENSMUST00000120206 363 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm24059-201ENSMUST00000157493 312 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm23773-201ENSMUST00000158985 296 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 AC155830.1-201ENSMUST00000220050 3836 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cpsf1Q9EPU4 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm13459-201ENSMUST00000121558 646 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm22380-201ENSMUST00000157479 95 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm23860-201ENSMUST00000179446 132 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm28654-201ENSMUST00000189801 379 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Trbv8-201ENSMUST00000194020 285 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm45327-201ENSMUST00000211612 565 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 AC132465.3-201ENSMUST00000219326 195 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm19073-201ENSMUST00000219978 555 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm24147-201ENSMUST00000082763 144 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.16□□□□□ -1.58
Cpsf1Q9EPU4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm12005-201ENSMUST00000121451 379 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm14383-201ENSMUST00000121637 386 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm24008-201ENSMUST00000157733 138 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm23257-201ENSMUST00000158322 132 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm22890-201ENSMUST00000158642 144 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Mir3070b-201ENSMUST00000175205 89 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms