Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm14987-201ENSMUST00000117820 676 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm11550-201ENSMUST00000118210 699 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm8430-201ENSMUST00000119780 471 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm16017-201ENSMUST00000119834 208 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm13677-201ENSMUST00000120739 595 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm25430-201ENSMUST00000157614 289 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm21999-201ENSMUST00000165985 387 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm3170-201ENSMUST00000168753 850 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm24103-201ENSMUST00000174930 77 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm3348-201ENSMUST00000177813 850 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm22851-201ENSMUST00000178741 94 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm25074-201ENSMUST00000178782 94 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm38098-201ENSMUST00000194115 241 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm42828-201ENSMUST00000199669 469 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm42663-201ENSMUST00000199883 351 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm45023-201ENSMUST00000207951 379 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm45588-201ENSMUST00000211213 630 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm18488-201ENSMUST00000215082 364 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm22807-201ENSMUST00000082737 129 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm25147-201ENSMUST00000083030 105 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm24578-201ENSMUST00000103970 129 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm25111-201ENSMUST00000116686 147 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm15034-201ENSMUST00000120043 349 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm23327-201ENSMUST00000157420 78 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm26486-201ENSMUST00000158021 110 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm25335-201ENSMUST00000158043 103 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm3030-201ENSMUST00000163410 516 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm8338-201ENSMUST00000163928 363 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm17538-201ENSMUST00000168236 327 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm4832-201ENSMUST00000182679 399 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm9320-201ENSMUST00000184151 473 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Mir6943-201ENSMUST00000185186 66 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm18791-201ENSMUST00000204611 726 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm44134-202ENSMUST00000204777 545 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm44539-201ENSMUST00000206010 238 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm18696-201ENSMUST00000220103 274 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm23447-201ENSMUST00000082798 163 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm25126-201ENSMUST00000083343 102 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx6-1Q99MA9 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx6-1Q99MA9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms