Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43489-201ENSMUST00000196810 993 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Gm44402-201ENSMUST00000203677 238 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Gm44857-201ENSMUST00000208331 196 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Gm22864-201ENSMUST00000083950 130 ntBASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Vps53Q8CCB4 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Svet1-201ENSMUST00000209370 3940 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm23746-201ENSMUST00000104229 125 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm25773-201ENSMUST00000116718 127 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm12190-201ENSMUST00000120001 187 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm16318-201ENSMUST00000162402 601 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm26991-201ENSMUST00000180950 620 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm29576-201ENSMUST00000188020 678 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm28354-201ENSMUST00000190904 678 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm43005-201ENSMUST00000199015 648 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm45209-201ENSMUST00000207122 353 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm45658-201ENSMUST00000209197 580 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm6177-201ENSMUST00000085589 465 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.43□□□□□ -1.54
Vps53Q8CCB4 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Snord66-201ENSMUST00000104051 75 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm13250-201ENSMUST00000117209 753 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm14600-201ENSMUST00000121032 630 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm22940-201ENSMUST00000158560 155 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm24664-201ENSMUST00000158939 100 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm18128-201ENSMUST00000172625 511 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Mir6344-201ENSMUST00000183462 104 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm28967-201ENSMUST00000187351 281 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm37193-201ENSMUST00000193087 513 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm44212-201ENSMUST00000205016 897 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm45171-201ENSMUST00000206360 736 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm21112-201ENSMUST00000212224 578 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm7760-201ENSMUST00000212265 578 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 Gm7807-201ENSMUST00000212475 578 ntBASIC5.42□□□□□ -1.54
Vps53Q8CCB4 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms