Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm9765-201ENSMUST00000043170 321 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm18954-201ENSMUST00000222200 1792 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm15994-201ENSMUST00000118029 402 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm25630-201ENSMUST00000084000 162 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm22023-201ENSMUST00000104354 130 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm12025-201ENSMUST00000117768 144 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm25843-201ENSMUST00000122582 314 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm25490-201ENSMUST00000158734 130 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm23927-201ENSMUST00000082466 215 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC3.34□□□□□ -1.87
Col6a6Q8C6K9 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.34□□□□□ -1.88
Col6a6Q8C6K9 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a6Q8C6K9 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col6a6Q8C6K9 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col6a6Q8C6K9 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm6058-201ENSMUST00000154261 399 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm24727-201ENSMUST00000158231 144 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm36934-201ENSMUST00000192007 306 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm35857-201ENSMUST00000212739 178 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm21007-201ENSMUST00000221024 326 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC3.33□□□□□ -1.88
Col6a6Q8C6K9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm13508-201ENSMUST00000121639 775 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm24550-201ENSMUST00000158648 279 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm43308-201ENSMUST00000197236 373 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm25407-201ENSMUST00000104102 134 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm9157-201ENSMUST00000117673 225 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm5762-201ENSMUST00000119204 258 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm6265-201ENSMUST00000149263 231 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms