Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.73□□□□□ -1.65
Ubfd1Q78JW9 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm22778-201ENSMUST00000104090 128 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm23608-201ENSMUST00000104545 128 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm16082-201ENSMUST00000115992 377 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm22676-201ENSMUST00000116972 129 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm12112-201ENSMUST00000117772 231 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm15951-201ENSMUST00000118377 400 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm15981-201ENSMUST00000119196 457 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm11631-201ENSMUST00000119220 156 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm23032-201ENSMUST00000157995 107 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm24944-201ENSMUST00000158330 128 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm27387-201ENSMUST00000184583 116 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm4412-201ENSMUST00000186660 433 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm38098-201ENSMUST00000194115 241 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm37659-201ENSMUST00000194574 111 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm19096-201ENSMUST00000209705 766 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm45367-201ENSMUST00000210171 347 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 CT010505.1-201ENSMUST00000227026 396 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm24921-201ENSMUST00000083024 107 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Mir27a-201ENSMUST00000083510 87 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm22350-201ENSMUST00000083924 156 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.72□□□□□ -1.65
Ubfd1Q78JW9 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Ubfd1Q78JW9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm12328-201ENSMUST00000118611 197 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm13484-201ENSMUST00000120738 412 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm15168-201ENSMUST00000121057 316 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm13132-201ENSMUST00000121194 472 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm24289-201ENSMUST00000157629 135 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm4134-201ENSMUST00000173244 563 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm26950-201ENSMUST00000182734 498 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm8599-201ENSMUST00000193033 457 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm43144-201ENSMUST00000198256 485 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm3690-201ENSMUST00000211341 262 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.71□□□□□ -1.66
Ubfd1Q78JW9 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms