Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Shroom4Q1W617 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC6.26□□□□□ -1.41
Shroom4Q1W617 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Shroom4Q1W617 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Shroom4Q1W617 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm14906-201ENSMUST00000119265 390 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm29484-201ENSMUST00000186067 324 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm29097-201ENSMUST00000190273 422 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm36964-201ENSMUST00000191876 198 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm37599-201ENSMUST00000193067 489 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm37617-201ENSMUST00000194309 159 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 AC161250.1-201ENSMUST00000213426 1111 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 AC155923.1-201ENSMUST00000215676 356 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 AC153532.1-201ENSMUST00000218126 1111 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Shroom4Q1W617 Gm43883-201ENSMUST00000204002 3750 ntBASIC6.25□□□□□ -1.41
Shroom4Q1W617 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm23577-201ENSMUST00000103950 110 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm15166-201ENSMUST00000120790 385 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm12095-201ENSMUST00000121962 816 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm28064-201ENSMUST00000185639 858 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 AC165106.3-201ENSMUST00000228191 3843 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Shroom4Q1W617 Gm43341-201ENSMUST00000200104 1308 ntBASIC6.24□□□□□ -1.41
Shroom4Q1W617 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm11262-201ENSMUST00000119326 833 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm13341-201ENSMUST00000120780 672 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm4725-201ENSMUST00000151048 587 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm7639-201ENSMUST00000212608 484 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 AC161054.1-201ENSMUST00000214319 184 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 AC192616.3-201ENSMUST00000220797 1124 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 AC115357.1-201ENSMUST00000227575 466 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Mir101b-201ENSMUST00000083622 97 ntBASIC6.23□□□□□ -1.41
Shroom4Q1W617 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Shroom4Q1W617 Gm43065-201ENSMUST00000198971 2092 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm25272-201ENSMUST00000104293 128 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm8757-201ENSMUST00000119660 372 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm24739-201ENSMUST00000158855 292 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Shroom4Q1W617 Gm37355-201ENSMUST00000193345 606 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 AC120394.1-201ENSMUST00000217153 351 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 AC134254.4-201ENSMUST00000223086 370 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 AC125464.1-201ENSMUST00000228013 512 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.22□□□□□ -1.41
Shroom4Q1W617 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Shroom4Q1W617 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms