Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 AC113059.2-201ENSMUST00000213462 3016 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm24469-201ENSMUST00000104487 131 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm22499-201ENSMUST00000104501 135 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 n-R5s202-201ENSMUST00000104517 114 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm14142-201ENSMUST00000117833 296 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm13567-201ENSMUST00000118026 247 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm13491-201ENSMUST00000118267 235 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm15332-201ENSMUST00000118386 357 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm11737-201ENSMUST00000118713 468 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm25655-201ENSMUST00000158465 290 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm25489-201ENSMUST00000158727 141 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm25834-201ENSMUST00000158916 101 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm23631-201ENSMUST00000175291 123 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm29597-201ENSMUST00000188035 308 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm29781-201ENSMUST00000203862 478 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 AC100733.1-201ENSMUST00000228494 407 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Col9a1Q05722 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col9a1Q05722 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.42□□□□□ -1.38
Col9a1Q05722 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col9a1Q05722 Gm10744-201ENSMUST00000220184 2706 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Tmem161b-206ENSMUST00000225069 2414 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col9a1Q05722 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col9a1Q05722 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm15331-201ENSMUST00000120225 385 ntBASIC6.41□□□□□ -1.38
Col9a1Q05722 Gm13488-201ENSMUST00000120419 179 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms