Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14575-201ENSMUST00000117210 560 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm11372-201ENSMUST00000117348 570 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm11878-201ENSMUST00000117908 400 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm7079-201ENSMUST00000119726 171 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm25781-201ENSMUST00000122527 84 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm22870-201ENSMUST00000157501 112 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col6a1Q04857 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm23631-201ENSMUST00000175291 123 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm10784-201ENSMUST00000178715 238 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm37313-201ENSMUST00000191673 290 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm37418-201ENSMUST00000195031 274 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 AC152946.2-201ENSMUST00000219071 337 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm22741-201ENSMUST00000083438 165 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm25859-201ENSMUST00000083710 91 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Gm24429-201ENSMUST00000104076 132 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm11781-201ENSMUST00000118328 472 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm11227-201ENSMUST00000119774 471 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Gm23700-201ENSMUST00000158842 102 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm9071-201ENSMUST00000165915 474 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6□□□□□ -1.45
Col6a1Q04857 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6□□□□□ -1.45
Col6a1Q04857 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm33354-201ENSMUST00000195448 906 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6□□□□□ -1.45
Col6a1Q04857 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Gm45215-201ENSMUST00000206407 395 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm10988-201ENSMUST00000209150 1088 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6□□□□□ -1.45
Col6a1Q04857 AC123944.2-201ENSMUST00000215290 382 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6□□□□□ -1.45
Col6a1Q04857 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6□□□□□ -1.45
Col6a1Q04857 AC154467.1-201ENSMUST00000227527 449 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Ear14-201ENSMUST00000049559 468 ntBASIC6□□□□□ -1.45
Col6a1Q04857 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Mir181a-2-201ENSMUST00000083489 76 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC6□□□□□ -1.45
Col6a1Q04857 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Col6a1Q04857 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 Gm5925-201ENSMUST00000105016 1497 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Col6a1Q04857 Gm36962-201ENSMUST00000192114 1761 ntBASIC6□□□□□ -1.45
Col6a1Q04857 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a1Q04857 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a1Q04857 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a1Q04857 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms