Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.23□□□□□ -1.57
Shmt1P50431 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Shmt1P50431 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.23□□□□□ -1.57
Shmt1P50431 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Shmt1P50431 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Shmt1P50431 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.23□□□□□ -1.57
Shmt1P50431 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Shmt1P50431 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.23□□□□□ -1.57
Shmt1P50431 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm26002-201ENSMUST00000101915 107 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm24935-201ENSMUST00000103770 110 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm15297-201ENSMUST00000117795 290 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm13162-201ENSMUST00000121481 454 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm14162-201ENSMUST00000121985 601 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm11344-201ENSMUST00000122011 335 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm22343-201ENSMUST00000122648 286 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm22199-201ENSMUST00000122660 126 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm26490-201ENSMUST00000157879 140 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.22□□□□□ -1.57
Shmt1P50431 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Mir6963-201ENSMUST00000183535 71 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm28740-201ENSMUST00000186142 215 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm18802-201ENSMUST00000186270 888 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm3933-201ENSMUST00000195391 439 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm43350-201ENSMUST00000196382 711 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm43035-201ENSMUST00000197626 517 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm3816-201ENSMUST00000209803 433 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.22□□□□□ -1.57
Shmt1P50431 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Shmt1P50431 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Shmt1P50431 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Shmt1P50431 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Shmt1P50431 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Shmt1P50431 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Shmt1P50431 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.22□□□□□ -1.57
Shmt1P50431 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Shmt1P50431 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Shmt1P50431 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.21□□□□□ -1.57
Shmt1P50431 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.21□□□□□ -1.57
Shmt1P50431 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Shmt1P50431 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Shmt1P50431 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm23948-201ENSMUST00000104030 132 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm11196-201ENSMUST00000119052 395 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm11692-201ENSMUST00000122121 902 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm23591-201ENSMUST00000157663 286 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm24188-201ENSMUST00000157980 108 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm24217-201ENSMUST00000158260 133 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm24939-201ENSMUST00000158325 137 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm28596-201ENSMUST00000185870 696 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm32295-201ENSMUST00000192558 696 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm31260-201ENSMUST00000193478 696 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.21□□□□□ -1.58
Shmt1P50431 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.21□□□□□ -1.58
Shmt1P50431 Gm44431-201ENSMUST00000203500 413 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms