Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col18a1P39061 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col18a1P39061 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.41
Col18a1P39061 Gm23133-201ENSMUST00000104255 135 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col18a1P39061 Gm15175-201ENSMUST00000117629 132 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm13785-201ENSMUST00000119099 690 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm13865-201ENSMUST00000120957 865 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm12155-201ENSMUST00000121267 160 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col18a1P39061 Gm23981-201ENSMUST00000157136 106 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm23391-201ENSMUST00000157579 104 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm23318-201ENSMUST00000158000 108 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm11392-201ENSMUST00000181419 710 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Mir6408-201ENSMUST00000183643 91 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm8296-201ENSMUST00000185597 524 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm19694-201ENSMUST00000192364 505 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col18a1P39061 Gm5284-201ENSMUST00000199053 903 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col18a1P39061 Gm42976-201ENSMUST00000200313 222 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC6.21□□□□□ -1.41
Col18a1P39061 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.21□□□□□ -1.41
Col18a1P39061 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Col18a1P39061 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.41
Col18a1P39061 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col18a1P39061 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm13439-201ENSMUST00000117541 409 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Gm15745-201ENSMUST00000119807 115 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm23467-201ENSMUST00000157127 159 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Gm23782-201ENSMUST00000157939 120 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col18a1P39061 Gm18417-201ENSMUST00000176564 648 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Gm19147-201ENSMUST00000199622 652 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC6.21□□□□□ -1.42
Col18a1P39061 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.21□□□□□ -1.42
Col18a1P39061 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Col18a1P39061 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm12131-201ENSMUST00000117479 359 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Gm12880-201ENSMUST00000120652 494 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Gm15116-201ENSMUST00000122248 663 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm22059-201ENSMUST00000157544 104 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Gm3221-201ENSMUST00000164869 440 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Gm23003-201ENSMUST00000179948 107 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm18445-201ENSMUST00000195502 774 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 AC156504.1-201ENSMUST00000214608 157 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 AC116589.1-201ENSMUST00000220634 327 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col18a1P39061 Mir465-201ENSMUST00000093563 74 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm43312-201ENSMUST00000201655 2466 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Col18a1P39061 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.2□□□□□ -1.42
Col18a1P39061 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col18a1P39061 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col18a1P39061 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col18a1P39061 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col18a1P39061 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col18a1P39061 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col18a1P39061 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.19□□□□□ -1.42
Col18a1P39061 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col18a1P39061 Gm23860-201ENSMUST00000179446 132 ntBASIC6.19□□□□□ -1.42
Col18a1P39061 Gm25120-201ENSMUST00000180148 79 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms