Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Mir711-201ENSMUST00000102188 82 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col2a1P28481 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm25667-201ENSMUST00000157701 275 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm25037-201ENSMUST00000175418 110 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm27903-201ENSMUST00000175482 126 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm37293-201ENSMUST00000191658 295 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm35857-201ENSMUST00000212739 178 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col2a1P28481 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col2a1P28481 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col2a1P28481 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col2a1P28481 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col2a1P28481 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col2a1P28481 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Col2a1P28481 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm14975-201ENSMUST00000118741 664 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm23667-201ENSMUST00000157466 120 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm22310-201ENSMUST00000157509 116 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm7634-201ENSMUST00000185778 553 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm28923-201ENSMUST00000187755 322 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm37966-201ENSMUST00000193122 326 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm36943-201ENSMUST00000194422 282 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm44355-201ENSMUST00000200417 104 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.29□□□□□ -1.72
Col2a1P28481 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.29□□□□□ -1.72
Col2a1P28481 Gm19073-201ENSMUST00000219978 555 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Mir101b-201ENSMUST00000083622 97 ntBASIC4.29□□□□□ -1.72
Col2a1P28481 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col2a1P28481 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col2a1P28481 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col2a1P28481 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.28□□□□□ -1.72
Col2a1P28481 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col2a1P28481 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 Gm14667-201ENSMUST00000119448 1350 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col2a1P28481 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Gm11325-201ENSMUST00000119967 469 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Gm22214-201ENSMUST00000157563 172 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.28□□□□□ -1.72
Col2a1P28481 Gm28148-201ENSMUST00000186924 697 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Col2a1P28481 Gm19196-201ENSMUST00000209258 357 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Gm45327-201ENSMUST00000211612 565 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col2a1P28481 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col2a1P28481 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col2a1P28481 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Col2a1P28481 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Col2a1P28481 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col2a1P28481 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col2a1P28481 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col2a1P28481 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col2a1P28481 Gm22718-201ENSMUST00000122701 315 ntBASIC4.27□□□□□ -1.73
Col2a1P28481 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col2a1P28481 Gm24675-201ENSMUST00000158757 259 ntBASIC4.27□□□□□ -1.73
Col2a1P28481 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col2a1P28481 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col2a1P28481 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.27□□□□□ -1.73
Col2a1P28481 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.27□□□□□ -1.73
Col2a1P28481 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col2a1P28481 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.27□□□□□ -1.73
Col2a1P28481 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.27□□□□□ -1.73
Col2a1P28481 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col2a1P28481 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col2a1P28481 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col2a1P28481 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col2a1P28481 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.27□□□□□ -1.73
Col2a1P28481 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col2a1P28481 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Col2a1P28481 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms