Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm5885-202ENSMUST00000203357 528 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm45034-201ENSMUST00000206831 482 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm44648-201ENSMUST00000208267 329 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm45610-201ENSMUST00000209227 784 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm19170-201ENSMUST00000212440 1084 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.57□□□□□ -1.84
Cdx1P18111 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
Cdx1P18111 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx1P18111 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx1P18111 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm26176-201ENSMUST00000083795 105 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx1P18111 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Cdx1P18111 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm14388-201ENSMUST00000118119 477 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm15168-201ENSMUST00000121057 316 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm7840-201ENSMUST00000122086 533 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm24113-201ENSMUST00000157477 276 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm23925-202ENSMUST00000188429 132 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx1P18111 Gm18900-201ENSMUST00000193218 584 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm43586-201ENSMUST00000195948 310 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Gm45651-201ENSMUST00000210857 335 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Cdx1P18111 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Cdx1P18111 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.56□□□□□ -1.84
Cdx1P18111 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx1P18111 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cdx1P18111 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cdx1P18111 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Cdx1P18111 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm24125-201ENSMUST00000104105 137 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm14050-201ENSMUST00000117052 346 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm12520-201ENSMUST00000117493 316 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm6079-201ENSMUST00000121356 404 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm12358-201ENSMUST00000121842 520 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm26085-201ENSMUST00000157900 116 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdx1P18111 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
Cdx1P18111 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm5372-201ENSMUST00000187540 409 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm5731-201ENSMUST00000190969 481 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms