Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm14681-201ENSMUST00000118047 411 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm27374-201ENSMUST00000183660 81 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm11456-201ENSMUST00000121070 256 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm36934-201ENSMUST00000192007 306 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm43093-201ENSMUST00000202439 1213 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm19987-201ENSMUST00000216339 499 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm37890-201ENSMUST00000195610 3992 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm19514-201ENSMUST00000206856 4489 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm14943-201ENSMUST00000118056 546 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm24787-201ENSMUST00000157380 123 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm6625-201ENSMUST00000177870 272 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm28069-201ENSMUST00000189926 214 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm24350-202ENSMUST00000198309 132 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 AC166263.1-201ENSMUST00000218586 238 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm23496-201ENSMUST00000157741 248 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Gm28924-201ENSMUST00000190012 241 ntBASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col6a3E9PWQ3 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm22043-201ENSMUST00000082993 158 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 AC108802.1-201ENSMUST00000219501 3142 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm24907-201ENSMUST00000116932 128 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm25820-202ENSMUST00000197479 128 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm43214-201ENSMUST00000199242 352 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm45269-201ENSMUST00000210359 282 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm45149-201ENSMUST00000206459 2172 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 AC158938.1-201ENSMUST00000225372 6720 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Mir291a-201ENSMUST00000104815 82 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm22849-201ENSMUST00000157713 307 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm24053-201ENSMUST00000158620 105 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm26988-201ENSMUST00000183296 945 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm43368-201ENSMUST00000200638 409 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Gm30534-201ENSMUST00000217928 207 ntBASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col6a3E9PWQ3 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col6a3E9PWQ3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms