Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gm23855-201ENSMUST00000158377 135 ntBASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.16□□□□□ -1.9
Col6a4A2AX52 Mir3058-201ENSMUST00000175126 91 ntBASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a4A2AX52 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.16□□□□□ -1.9
Col6a4A2AX52 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col6a4A2AX52 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Mir676-201ENSMUST00000102443 89 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm12760-201ENSMUST00000117861 482 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm3470-201ENSMUST00000160819 420 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm26746-201ENSMUST00000181722 487 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm9775-201ENSMUST00000189402 331 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm10916-201ENSMUST00000080330 483 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Col6a4A2AX52 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.15□□□□□ -1.9
Col6a4A2AX52 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm26254-201ENSMUST00000122491 118 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm24441-201ENSMUST00000157235 281 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm23198-201ENSMUST00000158811 91 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 AC166263.1-201ENSMUST00000218586 238 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm8785-201ENSMUST00000220259 487 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Gm21007-201ENSMUST00000221024 326 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.15□□□□□ -1.91
Col6a4A2AX52 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col6a4A2AX52 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm26607-201ENSMUST00000180661 867 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm28358-202ENSMUST00000189292 223 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm33973-201ENSMUST00000195148 534 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm44543-201ENSMUST00000209136 396 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm25800-201ENSMUST00000082636 134 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 AC122317.3-201ENSMUST00000219320 3524 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm8129-201ENSMUST00000118230 213 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms