Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Gm22572-201ENSMUST00000082985 105 ntBASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Rny1-201ENSMUST00000083767 112 ntBASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trim42Q9D2H5 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm25093-201ENSMUST00000103993 132 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm12765-201ENSMUST00000117273 615 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm14163-201ENSMUST00000117342 217 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm15382-201ENSMUST00000118011 537 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm11890-201ENSMUST00000119585 417 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm14267-201ENSMUST00000119751 496 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm15750-201ENSMUST00000120970 616 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm23888-201ENSMUST00000122690 253 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm22819-201ENSMUST00000157445 303 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Snora47-201ENSMUST00000157483 138 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm25942-201ENSMUST00000180080 110 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm29156-201ENSMUST00000187764 499 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm28974-201ENSMUST00000187893 231 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm43914-201ENSMUST00000203592 594 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm45742-201ENSMUST00000212400 433 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm23515-201ENSMUST00000082829 107 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim42Q9D2H5 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm11403-201ENSMUST00000122195 369 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm23279-201ENSMUST00000157912 97 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm9294-201ENSMUST00000165198 789 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm21999-201ENSMUST00000165985 387 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm3084-201ENSMUST00000169967 598 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm24407-201ENSMUST00000177864 141 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.85□□□□□ -1.47
Trim42Q9D2H5 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms