Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm20415-201ENSMUST00000172877 423 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm20794-201ENSMUST00000177626 628 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm8649-201ENSMUST00000181799 233 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm27161-201ENSMUST00000183960 562 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm33952-201ENSMUST00000197795 408 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm29785-201ENSMUST00000217033 383 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx6-1Q99MA9 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm13503-201ENSMUST00000119017 446 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm7609-204ENSMUST00000161424 461 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm28579-201ENSMUST00000186143 369 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm38050-201ENSMUST00000191904 238 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm20203-201ENSMUST00000192352 332 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm9238-201ENSMUST00000196181 329 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm43624-201ENSMUST00000197368 180 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm42475-201ENSMUST00000201212 295 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm18468-201ENSMUST00000207321 369 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm18470-201ENSMUST00000207467 420 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm18465-201ENSMUST00000207468 369 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm18464-201ENSMUST00000207803 420 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm18458-201ENSMUST00000207908 369 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm18461-201ENSMUST00000208421 420 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm45870-201ENSMUST00000211269 601 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm24268-201ENSMUST00000082990 110 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Mir342-201ENSMUST00000083502 99 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm9386-201ENSMUST00000095195 381 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx6-1Q99MA9 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.32□□□□□ -1.56
Nkx6-1Q99MA9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms