Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm11774-201ENSMUST00000118601 293 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm11805-201ENSMUST00000121238 600 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm6175-201ENSMUST00000121351 400 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm14364-201ENSMUST00000129209 267 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm23537-201ENSMUST00000157536 330 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm17907-201ENSMUST00000173150 710 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Igkv2-105-201ENSMUST00000196931 377 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm43631-201ENSMUST00000202011 369 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm44142-201ENSMUST00000203358 311 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm31849-201ENSMUST00000220306 375 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm32526-201ENSMUST00000221878 981 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm11826-201ENSMUST00000118781 438 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm13475-201ENSMUST00000119290 234 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm11825-201ENSMUST00000120710 736 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm22534-201ENSMUST00000158173 104 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm24810-201ENSMUST00000175317 70 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm29134-201ENSMUST00000186579 126 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm5058-201ENSMUST00000187331 463 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm28241-201ENSMUST00000190916 235 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm44580-201ENSMUST00000206333 877 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm7990-201ENSMUST00000212126 593 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm29884-201ENSMUST00000218403 453 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 AC131029.2-202ENSMUST00000228430 496 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Mir449a-201ENSMUST00000083641 91 ntBASIC6.06□□□□□ -1.44
Clp1Q99LI9 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clp1Q99LI9 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm14359-201ENSMUST00000118883 424 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm9078-201ENSMUST00000119126 617 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm4234-201ENSMUST00000119747 714 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm14472-201ENSMUST00000119815 282 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm5060-201ENSMUST00000120072 599 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm8338-201ENSMUST00000163928 363 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm17086-201ENSMUST00000171346 484 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm22650-201ENSMUST00000175138 105 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm22852-201ENSMUST00000177899 101 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm25314-201ENSMUST00000178810 79 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm26731-201ENSMUST00000180683 543 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Mir7028-201ENSMUST00000185016 64 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm37495-201ENSMUST00000194590 264 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm37817-201ENSMUST00000195276 434 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms