Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm27679-201ENSMUST00000184612 84 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm37658-201ENSMUST00000192672 315 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm5551-201ENSMUST00000199720 690 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm44794-201ENSMUST00000206550 411 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm44611-201ENSMUST00000207507 355 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm19880-201ENSMUST00000207731 318 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Fus-202ENSMUST00000079045 2623 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.23□□□□□ -1.57
ParpbpQ6IRT3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm11908-201ENSMUST00000117755 347 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm9059-201ENSMUST00000118319 183 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm22208-201ENSMUST00000122658 110 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm23539-201ENSMUST00000157537 224 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm25227-201ENSMUST00000158204 112 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Mir5110-201ENSMUST00000175537 87 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm28146-201ENSMUST00000185517 701 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm28574-201ENSMUST00000185757 699 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm28397-201ENSMUST00000187970 699 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm29366-201ENSMUST00000190481 699 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm2367-201ENSMUST00000192374 472 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm37616-201ENSMUST00000193974 322 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm37308-201ENSMUST00000194684 100 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm43825-201ENSMUST00000199650 734 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm43116-201ENSMUST00000199789 195 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm44125-201ENSMUST00000203068 448 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm2676-201ENSMUST00000207279 606 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm3867-201ENSMUST00000086108 279 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ParpbpQ6IRT3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
ParpbpQ6IRT3 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
ParpbpQ6IRT3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms