Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm25807-201ENSMUST00000122783 305 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm24008-201ENSMUST00000157733 138 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm37639-201ENSMUST00000191623 2785 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm42850-201ENSMUST00000202094 201 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm44253-201ENSMUST00000203387 628 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 AC102369.1-201ENSMUST00000218415 373 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 AC139750.2-201ENSMUST00000224424 386 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 AC156790.3-201ENSMUST00000226200 254 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 CT030662.1-201ENSMUST00000227380 232 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col17a1Q07563 Gm25799-201ENSMUST00000082643 107 ntBASIC6.91□□□□□ -1.3
Col17a1Q07563 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col17a1Q07563 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col17a1Q07563 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col17a1Q07563 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col17a1Q07563 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col17a1Q07563 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col17a1Q07563 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.9□□□□□ -1.3
Col17a1Q07563 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col17a1Q07563 Gm24788-201ENSMUST00000104283 156 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm25413-201ENSMUST00000158544 312 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm8224-201ENSMUST00000166178 497 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm9712-201ENSMUST00000210842 311 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 AC140451.2-202ENSMUST00000226156 574 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col17a1Q07563 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col17a1Q07563 n-R5s54-201ENSMUST00000083837 112 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col17a1Q07563 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC6.9□□□□□ -1.31
Col17a1Q07563 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col17a1Q07563 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 AC122887.2-201ENSMUST00000219465 1603 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm15176-201ENSMUST00000117734 135 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm24371-201ENSMUST00000122662 267 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm14651-201ENSMUST00000147192 442 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm24724-201ENSMUST00000158230 107 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm28211-201ENSMUST00000190920 315 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm38395-201ENSMUST00000199904 830 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm18877-201ENSMUST00000207706 539 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm8748-201ENSMUST00000211125 587 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm45420-201ENSMUST00000211243 425 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC6.89□□□□□ -1.31
Col17a1Q07563 AC164116.2-201ENSMUST00000225398 1038 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 AC107453.2-201ENSMUST00000227714 655 ntBASIC6.89□□□□□ -1.31
Col17a1Q07563 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col17a1Q07563 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC6.89□□□□□ -1.31
Col17a1Q07563 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Col17a1Q07563 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col17a1Q07563 Gm37983-201ENSMUST00000193207 2006 ntBASIC6.88□□□□□ -1.31
Col17a1Q07563 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.88□□□□□ -1.31
Col17a1Q07563 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Col17a1Q07563 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col17a1Q07563 Gm37749-201ENSMUST00000193917 1899 ntBASIC6.88□□□□□ -1.31
Col17a1Q07563 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col17a1Q07563 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col17a1Q07563 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.88□□□□□ -1.31
Col17a1Q07563 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.88□□□□□ -1.31
Col17a1Q07563 Gm5258-201ENSMUST00000165437 327 ntBASIC6.88□□□□□ -1.31
Col17a1Q07563 Gm26991-201ENSMUST00000180950 620 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms