Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.8□□□□□ -1.48
Sox1P53783 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox1P53783 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Sox1P53783 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox1P53783 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox1P53783 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm23691-201ENSMUST00000101878 107 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm11408-201ENSMUST00000117889 519 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm7363-201ENSMUST00000119883 399 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm11829-201ENSMUST00000121003 282 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm12732-201ENSMUST00000121688 180 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm22276-201ENSMUST00000122469 129 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm24836-201ENSMUST00000122609 108 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm5699-201ENSMUST00000152491 723 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox1P53783 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm25243-201ENSMUST00000174912 207 ntBASIC5.79□□□□□ -1.48
Sox1P53783 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm27611-201ENSMUST00000184690 108 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm19761-201ENSMUST00000205372 391 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm44776-201ENSMUST00000207212 381 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Sox1P53783 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox1P53783 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm35262-201ENSMUST00000215133 267 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox1P53783 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Gm22741-201ENSMUST00000083438 165 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Sox1P53783 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox1P53783 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox1P53783 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox1P53783 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.79□□□□□ -1.48
Sox1P53783 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Sox1P53783 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox1P53783 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.78□□□□□ -1.48
Sox1P53783 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Sox1P53783 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm11346-201ENSMUST00000118346 704 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm11784-201ENSMUST00000118568 474 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm11262-201ENSMUST00000119326 833 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm6058-201ENSMUST00000154261 399 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Gm20549-201ENSMUST00000174804 429 ntBASIC5.78□□□□□ -1.48
Sox1P53783 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Gm28299-201ENSMUST00000189908 339 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm29332-201ENSMUST00000190829 227 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm8747-201ENSMUST00000195392 751 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm43652-201ENSMUST00000196219 675 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm4321-201ENSMUST00000200520 442 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm8423-201ENSMUST00000211387 607 ntBASIC5.78□□□□□ -1.48
Sox1P53783 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.78□□□□□ -1.48
Sox1P53783 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.78□□□□□ -1.48
Sox1P53783 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.78□□□□□ -1.48
Sox1P53783 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.78□□□□□ -1.48
Sox1P53783 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm24622-201ENSMUST00000082619 162 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms