Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Smok3c-201ENSMUST00000110967 2330 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm43481-201ENSMUST00000201715 3672 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm44873-201ENSMUST00000208490 3428 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm525-201ENSMUST00000100619 557 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s102-201ENSMUST00000101990 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm25083-201ENSMUST00000102319 92 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm23358-201ENSMUST00000103887 110 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm25396-201ENSMUST00000103981 133 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm25762-201ENSMUST00000103984 132 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s172-201ENSMUST00000104508 114 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm24071-201ENSMUST00000104520 132 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm14188-201ENSMUST00000105060 168 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm26472-201ENSMUST00000116760 83 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm14107-201ENSMUST00000117774 330 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm15666-201ENSMUST00000118054 976 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm15464-201ENSMUST00000118718 431 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm13687-201ENSMUST00000119857 282 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm13038-201ENSMUST00000119886 459 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm14143-201ENSMUST00000121686 357 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm14262-201ENSMUST00000148309 326 ntTSL 3 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm22562-201ENSMUST00000157334 111 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm22811-201ENSMUST00000157468 154 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm23392-201ENSMUST00000157580 113 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm24399-201ENSMUST00000157869 74 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm4246-201ENSMUST00000172822 216 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Mir5135-201ENSMUST00000174997 79 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s101-201ENSMUST00000177910 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s114-201ENSMUST00000178297 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s119-201ENSMUST00000178861 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm4617-201ENSMUST00000178993 331 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s127-201ENSMUST00000179185 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s129-201ENSMUST00000180122 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 n-R5s131-201ENSMUST00000180280 119 ntBASIC1.16□□□□□ -2.22
Gm4559A4IF42 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms