Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Nkx6-1Q99MA9 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm11386-201ENSMUST00000117761 347 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm11826-201ENSMUST00000118781 438 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm15428-201ENSMUST00000121352 333 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm12267-201ENSMUST00000121609 761 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm6081-201ENSMUST00000134472 489 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm11507-201ENSMUST00000156462 412 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm22101-201ENSMUST00000157928 103 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm25227-201ENSMUST00000158204 112 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm23852-201ENSMUST00000158376 77 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm24306-201ENSMUST00000180229 79 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm28141-201ENSMUST00000186676 342 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm38291-201ENSMUST00000193671 259 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm5027-201ENSMUST00000206700 375 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm26107-201ENSMUST00000083972 107 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.35□□□□□ -1.55
Nkx6-1Q99MA9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm25537-201ENSMUST00000103851 109 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm11409-201ENSMUST00000118621 403 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm15803-201ENSMUST00000120118 394 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm12732-201ENSMUST00000121688 180 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm24385-201ENSMUST00000122694 350 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm22563-201ENSMUST00000157333 269 ntBASIC5.34□□□□□ -1.55
Nkx6-1Q99MA9 Gm23513-201ENSMUST00000158181 133 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms