Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm7429-201ENSMUST00000118664 348 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm11890-201ENSMUST00000119585 417 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm12654-201ENSMUST00000120387 587 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm13259-201ENSMUST00000120792 456 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm12488-201ENSMUST00000122449 499 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm9457-201ENSMUST00000180176 372 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm42539-201ENSMUST00000197009 308 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm42776-201ENSMUST00000198031 406 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm44938-201ENSMUST00000208614 427 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm18409-202ENSMUST00000220105 529 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 AC133156.1-202ENSMUST00000227284 363 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm22229-201ENSMUST00000082987 108 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm23451-201ENSMUST00000083328 122 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Olfr203-201ENSMUST00000089305 924 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm44708-201ENSMUST00000205580 2237 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim47Q8C0E3 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm43201-201ENSMUST00000195925 3416 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm15382-201ENSMUST00000118011 537 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm12686-201ENSMUST00000120546 397 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm24914-201ENSMUST00000157285 313 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm22538-201ENSMUST00000158169 299 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm22116-201ENSMUST00000158791 141 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Mir5112-201ENSMUST00000174897 60 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Snora15-201ENSMUST00000177461 131 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm18427-201ENSMUST00000195422 515 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm44481-201ENSMUST00000197288 84 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm44339-201ENSMUST00000200598 84 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm8132-201ENSMUST00000204938 640 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm25853-201ENSMUST00000082793 132 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm24029-201ENSMUST00000083928 143 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim47Q8C0E3 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms