Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm23256-201ENSMUST00000102235 110 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm26140-201ENSMUST00000103807 110 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm22472-201ENSMUST00000104115 134 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm23608-201ENSMUST00000104545 128 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm15001-201ENSMUST00000117657 795 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm8202-201ENSMUST00000117682 310 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm12237-201ENSMUST00000120158 470 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm15530-201ENSMUST00000122206 555 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm25103-201ENSMUST00000122671 318 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx1P18111 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx1P18111 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm22908-201ENSMUST00000177620 110 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm5558-201ENSMUST00000178933 495 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Mir6410-201ENSMUST00000184204 104 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm27457-201ENSMUST00000184771 156 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm29525-201ENSMUST00000189844 699 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm38046-201ENSMUST00000192733 550 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm19418-201ENSMUST00000197436 580 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 AL645522.1-201ENSMUST00000197692 104 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm45189-201ENSMUST00000208567 363 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cdx1P18111 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Gm24144-201ENSMUST00000082632 111 ntBASIC3.6□□□□□ -1.83
Cdx1P18111 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Cdx1P18111 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx1P18111 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx1P18111 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdx1P18111 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm25419-201ENSMUST00000104215 191 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm11874-201ENSMUST00000117437 130 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm7421-201ENSMUST00000119298 639 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm13737-201ENSMUST00000119793 232 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm7365-201ENSMUST00000120877 639 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.59□□□□□ -1.83
Cdx1P18111 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm24931-201ENSMUST00000158324 107 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdx1P18111 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm27875-201ENSMUST00000184425 123 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm4412-201ENSMUST00000186660 433 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm28594-201ENSMUST00000187022 661 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm20954-201ENSMUST00000189078 644 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm8599-201ENSMUST00000193033 457 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm37431-201ENSMUST00000195102 111 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm43814-201ENSMUST00000197851 413 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Trav3-2-201ENSMUST00000198999 305 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm6064-201ENSMUST00000203999 454 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.59□□□□□ -1.83
Cdx1P18111 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms