Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm11281-201ENSMUST00000141391 576 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm24014-201ENSMUST00000157728 157 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm28917-201ENSMUST00000187294 237 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm29408-201ENSMUST00000187536 216 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.87□□□□□ -1.63
Col3a1P08121 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.87□□□□□ -1.63
Col3a1P08121 Gm7786-201ENSMUST00000210494 436 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 Gm19572-201ENSMUST00000214326 338 ntBASIC4.87□□□□□ -1.63
Col3a1P08121 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col3a1P08121 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col3a1P08121 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Col3a1P08121 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col3a1P08121 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col3a1P08121 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Col3a1P08121 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col3a1P08121 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm14861-201ENSMUST00000119451 455 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm11446-201ENSMUST00000121319 866 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm11403-201ENSMUST00000122195 369 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.86□□□□□ -1.63
Col3a1P08121 Gm14368-201ENSMUST00000145305 415 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm23082-201ENSMUST00000157852 133 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Spin2g-201ENSMUST00000178425 687 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm27828-201ENSMUST00000184108 119 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm28186-201ENSMUST00000187447 679 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm28654-201ENSMUST00000189801 379 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm36994-201ENSMUST00000192941 492 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm37001-201ENSMUST00000193377 190 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm36974-201ENSMUST00000194200 1071 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm44392-201ENSMUST00000196758 115 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.86□□□□□ -1.63
Col3a1P08121 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col3a1P08121 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col3a1P08121 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col3a1P08121 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.86□□□□□ -1.63
Col3a1P08121 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col3a1P08121 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Col3a1P08121 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.86□□□□□ -1.63
Col3a1P08121 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col3a1P08121 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col3a1P08121 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col3a1P08121 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.86□□□□□ -1.63
Col3a1P08121 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm25765-201ENSMUST00000104100 132 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Gm11761-201ENSMUST00000121392 445 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm23391-201ENSMUST00000157579 104 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Gm23865-201ENSMUST00000157723 97 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm17155-201ENSMUST00000165969 473 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm37828-201ENSMUST00000192496 432 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC4.85□□□□□ -1.63
Col3a1P08121 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col3a1P08121 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col3a1P08121 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col3a1P08121 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.85□□□□□ -1.63
Col3a1P08121 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Col3a1P08121 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.84□□□□□ -1.63
Col3a1P08121 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col3a1P08121 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col3a1P08121 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Col3a1P08121 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Col3a1P08121 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col3a1P08121 Gm12931-201ENSMUST00000117046 324 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Gm12383-201ENSMUST00000120628 760 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 Gm12731-201ENSMUST00000120932 268 ntBASIC4.84□□□□□ -1.63
Col3a1P08121 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col3a1P08121 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms